Bacterial Diversity in Alpine Lakes:A Review from the Third Pole Region

Namita Paudel Adhikari; Subash Adhikari; Xiaobo Liu; Liang Shen; Zhengquan Gu

doi:10.1007/s12583-018-1206-5

Volume 30 Issue 2

Apr 2019

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Journal of Earth Science > 2019 > 30(2): 387-396.

Namita Paudel Adhikari, Subash Adhikari, Xiaobo Liu, Liang Shen, Zhengquan Gu. Bacterial Diversity in Alpine Lakes:A Review from the Third Pole Region. Journal of Earth Science, 2019, 30(2): 387-396. doi: 10.1007/s12583-018-1206-5

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Namita Paudel Adhikari, Subash Adhikari, Xiaobo Liu, Liang Shen, Zhengquan Gu. Bacterial Diversity in Alpine Lakes:A Review from the Third Pole Region. Journal of Earth Science, 2019, 30(2): 387-396. doi: 10.1007/s12583-018-1206-5

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Bacterial Diversity in Alpine Lakes:A Review from the Third Pole Region

doi: 10.1007/s12583-018-1206-5

Namita Paudel Adhikari^{1,2,3
,
,},
Subash Adhikari^2,3,4,
Xiaobo Liu^{5
,
,},
Liang Shen^1,2,
Zhengquan Gu^1,2,3

1.
Key Laboratory of Alpine Ecology and Biodiversity, Institute of Tibetan Plateau Research, Chinese Academy of Sciences, Beijing 100101, China
2.
Key Laboratory of Tibetan Environment Changes and Land Surface Processes, Institute of Tibetan Plateau Research, Chinese Academy of Sciences, Beijing 100101, China
3.
University of Chinese Academy of Science, Beijing 100049, China
4.
Janapriya Multiple Campus, Tribhuvan University, Pokhara 33700, Nepal
5.
Kathmandu Center for Research and Education, CAS-TU, Kathmandu 44618, Nepal

More Information

Corresponding author: Namita Paudel Adhikari; Xiaobo Liu
Received Date: 27 Mar 2018
Accepted Date: 30 Sep 2018
Publish Date: 01 Apr 2019

Abstract

Abstract

Microorganisms are unique among all of the living organisms because of their high population size, advanced genetic diversity, short generation time, and quick response to the small change in environmental conditions. Remote alpine lakes of the Third Pole region provide the unique habitat for microorganisms acting as a natural laboratory and offering the information about the ecological roles of microorganisms. Many researchers focused on microbial communities as well as the impact of physicochemical, biological and hydrological parameters in lakes of this region since decades but the comprehensive review focusing on bacterial diversity and the role of environmental parameters still lacks. Here we reviewed bacterial diversity in lakes of the Third Pole region by analyzing 16S rRNA clone libraries accessed from previous research findings. A total of 5 388 bacterial 16S rRNA gene sequences were analyzed and classified into different phylogenetic groups. The average relative abundance of dominant taxa includes Betaproteobacteria (19%), Bacteroidetes (18%), Gammaproteobacteria (16%), Actinobacteria (15%), Alphaproteobacteria (14%), Cyanobacteria (7%), and Firmicutes (5%). Several adaptational strategies were adopted by these dominant bacterial groups in order to accommodate in the respective habitat. Nevertheless, lake water properties like temperature, pH, salinity, incident UV radiation, turbidity, and nutrients also played role in bacterial diversity.
- bacterial diversity,
- alpine lakes,
- 16S rRNA,
- Third Pole region

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References(71)

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